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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKB13011.1CobN component of cobalt chelatase involved in B12 biosynthesis. (1328 aa)    
Predicted Functional Partners:
AKB13006.1
ChlD component of cobalt chelatase involved in B12 biosynthesis.
 
  
 0.969
cbiA
Cobyrinic acid A,C-diamide synthase; Catalyzes the ATP-dependent amidation of the two carboxylate groups at positions a and c of cobyrinate, using either L-glutamine or ammonia as the nitrogen source. Involved in the biosynthesis of the unique nickel-containing tetrapyrrole coenzyme F430, the prosthetic group of methyl-coenzyme M reductase (MCR), which plays a key role in methanogenesis and anaerobic methane oxidation. Catalyzes the ATP- dependent amidation of the two carboxylate groups at positions a and c of Ni-sirohydrochlorin, using L-glutamine or ammonia as the nitrogen source.
 
 
 0.948
AKB13919.1
CobN-like chelatase BtuS for metalloporphyrine salvage.
  
  
 
0.920
AKB13010.1
PQQ enzyme repeat domain protein.
 
     0.816
AKB13009.1
PQQ enzyme repeat domain protein.
 
     0.810
AKB13012.1
Hypothetical protein.
       0.751
AKB13921.1
Putative transporter PduT for various metalloporphyrins.
 
  
 0.687
AKB13008.1
Hypothetical protein.
       0.675
AKB13013.1
ATPase component of general energizing module of ECF transporters.
     
 0.653
AKB13016.1
ABC transporter, permease protein.
 
    0.648
Your Current Organism:
Methanosarcina thermophila
NCBI taxonomy Id: 523844
Other names: M. thermophila TM-1, Methanosarcina thermophila OCM 12, Methanosarcina thermophila TM-1, Methanosarcina thermophila str. TM-1, Methanosarcina thermophila strain TM-1
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