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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKB13013.1ATPase component of general energizing module of ECF transporters. (581 aa)    
Predicted Functional Partners:
AKB13014.1
Transmembrane component of general energizing module of ECF transporters.
 
 
 0.978
AKB13379.1
Transmembrane component BioN of energizing module of biotin ECF transporter.
 
 
 0.902
AKB13257.1
Transmembrane component NikQ of energizing module of nickel ECF transporter.
 
 
 0.873
AKB12823.1
Transmembrane component CbiQ of energizing module of cobalt ECF transporter.
 
 
 0.858
AKB13376.1
Substrate-specific component BioY of biotin ECF transporter.
 
 
 
 0.835
AKB13258.1
Substrate-specific component NikM of nickel ECF transporter.
 
 
 0.785
AKB12821.1
Substrate-specific component CbiM of cobalt ECF transporter.
  
 
 0.739
AKB13259.1
Additional substrate-specific component NikN of nickel ECF transporter.
  
 
 0.739
AKB13015.1
ABC transporter, ATP-binding protein.
 
  
0.736
AKB13016.1
ABC transporter, permease protein.
       0.704
Your Current Organism:
Methanosarcina thermophila
NCBI taxonomy Id: 523844
Other names: M. thermophila TM-1, Methanosarcina thermophila OCM 12, Methanosarcina thermophila TM-1, Methanosarcina thermophila str. TM-1, Methanosarcina thermophila strain TM-1
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