Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
AKB13029.1Formylmethanofuran dehydrogenase subunit A. (572 aa)    
Predicted Functional Partners:
AKB13028.1
Formylmethanofuran dehydrogenase subunit B.
 
 0.998
AKB13030.1
Formylmethanofuran dehydrogenase subunit C.
 
 0.998
ftr
Formylmethanofuran--tetrahydromethanopterin N-formyltransferase; Catalyzes the reversible transfer of a formyl group from formylmethanofuran (formyl-MFR) to tetrahydromethanopterin (H(4)MPT) so as to produce 5-formyl tetrahydromethanopterin (5-formyl-H(4)MPT) and methanofuran (MFR); Belongs to the FTR family.
 
 
 0.995
AKB13027.1
Formylmethanofuran dehydrogenase (tungsten) subunit D.
 
 
 0.976
AKB13525.1
Formylmethanofuran dehydrogenase (molybdenum) subunit C.
 
 
 0.953
AKB13527.1
Formylmethanofuran dehydrogenase (molybdenum) subunit B.
 
 
 0.940
AKB12130.1
Formylmethanofuran dehydrogenase subunit B.
 
 
 0.933
AKB12129.1
Formylmethanofuran dehydrogenase subunit D.
 
 
 0.923
AKB13526.1
Formylmethanofuran dehydrogenase (molybdenum) subunit D.
 
 
 0.916
AKB12134.1
Hypothetical protein.
 
 
 0.914
Your Current Organism:
Methanosarcina thermophila
NCBI taxonomy Id: 523844
Other names: M. thermophila TM-1, Methanosarcina thermophila OCM 12, Methanosarcina thermophila TM-1, Methanosarcina thermophila str. TM-1, Methanosarcina thermophila strain TM-1
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