Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
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from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
AKB13256.1ATPase component NikO of energizing module of nickel ECF transporter; Part of an ABC transporter complex. Responsible for energy coupling to the transport system. (327 aa)    
Predicted Functional Partners:
AKB13257.1
Transmembrane component NikQ of energizing module of nickel ECF transporter.
 
 0.993
AKB12823.1
Transmembrane component CbiQ of energizing module of cobalt ECF transporter.
 
 0.988
AKB12821.1
Substrate-specific component CbiM of cobalt ECF transporter.
 
 
 0.975
cbiN
Additional substrate-specific component CbiN of cobalt ECF transporter; Part of the energy-coupling factor (ECF) transporter complex CbiMNOQ involved in cobalt import; Belongs to the CbiN family.
 
 
 0.969
AKB13258.1
Substrate-specific component NikM of nickel ECF transporter.
 
 
 0.961
AKB13259.1
Additional substrate-specific component NikN of nickel ECF transporter.
 
 
 0.918
AKB12064.1
Oligopeptide transport system permease protein OppB; TCDB 3.A.1.5.1.
   
0.911
AKB12824.1
ATPase component CbiO of energizing module of cobalt ECF transporter; Part of an ABC transporter complex. Responsible for energy coupling to the transport system.
 
  
 
0.907
AKB13376.1
Substrate-specific component BioY of biotin ECF transporter.
 
 
 
 0.883
AKB13379.1
Transmembrane component BioN of energizing module of biotin ECF transporter.
 
 
 0.859
Your Current Organism:
Methanosarcina thermophila
NCBI taxonomy Id: 523844
Other names: M. thermophila TM-1, Methanosarcina thermophila OCM 12, Methanosarcina thermophila TM-1, Methanosarcina thermophila str. TM-1, Methanosarcina thermophila strain TM-1
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