STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKB13443.1UDP-glucose dehydrogenase; Belongs to the UDP-glucose/GDP-mannose dehydrogenase family. (477 aa)    
Predicted Functional Partners:
AKB13445.1
UDP-4-amino-4-deoxy-L-arabinose--oxoglutarate aminotransferase; Belongs to the DegT/DnrJ/EryC1 family.
 
  
 0.903
AKB13444.1
Myo-inositol 2-dehydrogenase.
 
  
 0.844
AKB13442.1
Hypothetical protein.
 
    0.748
AKB13446.1
Acetyltransferase.
 
   
 0.709
AKB12929.1
dTDP-glucose 4,6-dehydratase.
  
  
 0.582
AKB12096.1
Serine acetyltransferase; PaaD-like protein (DUF59) involved in Fe-S cluster assembly.
  
  
 0.557
AKB13434.1
UDP-glucose 4-epimerase.
  
 0.542
AKB12486.1
Heteropolysaccharide repeat unit export protein.
 
  
 0.541
AKB12950.1
Membrane protein involved in the export of O-antigen, teichoic acid lipoteichoic acids.
 
  
 0.541
AKB13468.1
Hypothetical protein.
 
  
 0.521
Your Current Organism:
Methanosarcina thermophila
NCBI taxonomy Id: 523844
Other names: M. thermophila TM-1, Methanosarcina thermophila OCM 12, Methanosarcina thermophila TM-1, Methanosarcina thermophila str. TM-1, Methanosarcina thermophila strain TM-1
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