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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
matArchaeal S-adenosylmethionine synthetase; Catalyzes the formation of S-adenosylmethionine from methionine and ATP; Belongs to the AdoMet synthase 2 family. (398 aa)    
Predicted Functional Partners:
AKB12181.1
5-methyltetrahydropteroyltriglutamate-- homocysteine methyltransferase.
     
 0.911
AKB13611.1
5-methyltetrahydropteroyltriglutamate-- homocysteine methyltransferase.
     
 0.911
AKB13612.1
5-methyltetrahydropteroyltriglutamate-- homocysteine methyltransferase.
     
 0.911
AKB13088.1
Archaeal S-adenosylmethionine synthetase.
  
  
 
0.906
AKB13687.1
Ribosomal RNA adenine dimethylase.
    
  0.900
AKB13250.1
Hypothetical protein.
 
     0.540
carS
Phosphatidate cytidylyltransferase; Catalyzes the formation of CDP-2,3-bis-(O-geranylgeranyl)-sn- glycerol (CDP-archaeol) from 2,3-bis-(O-geranylgeranyl)-sn-glycerol 1- phosphate (DGGGP) and CTP. This reaction is the third ether-bond- formation step in the biosynthesis of archaeal membrane lipids.
 
     0.509
cmk
Cytidylate kinase.
  
     0.502
AKB13559.1
Archaeosine tRNA-ribosyltransferase type 2.
 
     0.481
AKB13348.1
Transcription factor.
  
    0.476
Your Current Organism:
Methanosarcina thermophila
NCBI taxonomy Id: 523844
Other names: M. thermophila TM-1, Methanosarcina thermophila OCM 12, Methanosarcina thermophila TM-1, Methanosarcina thermophila str. TM-1, Methanosarcina thermophila strain TM-1
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