Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
AKB13772.1Sodium-solute symporter, putative; Belongs to the sodium:solute symporter (SSF) (TC 2.A.21) family. (639 aa)    
Predicted Functional Partners:
AKB13586.1
Chemotaxis protein methyltransferase CheR.
     
 0.719
AKB13590.1
Two-component response regulator.
  
  
 0.599
AKB13759.1
Hypothetical protein.
       0.575
hpt
Adenine phosphoribosyltransferase; Catalyzes a salvage reaction resulting in the formation of IMP that is energically less costly than de novo synthesis. Belongs to the purine/pyrimidine phosphoribosyltransferase family. Archaeal HPRT subfamily.
  
  
 0.495
AKB13768.1
Hypothetical protein.
 
     0.463
AKB12962.1
Amino acid ABC transporter, ATP-binding protein.
  
  
 0.444
AKB12108.1
Proton/glutamate symport protein / Sodium/glutamate symport protein.
 
  
 0.438
AKB13436.1
Hypothetical protein.
  
     0.422
AKB13593.1
Putative permease.
 
   
 0.421
AKB13767.1
Putative carboxyl-terminal-processing protease, deltaproteobacterial.
 
     0.410
Your Current Organism:
Methanosarcina thermophila
NCBI taxonomy Id: 523844
Other names: M. thermophila TM-1, Methanosarcina thermophila OCM 12, Methanosarcina thermophila TM-1, Methanosarcina thermophila str. TM-1, Methanosarcina thermophila strain TM-1
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