Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
AKB13896.1Glycosyltransferase. (381 aa)    
Predicted Functional Partners:
cofD
2-phospho-L-lactate transferase; Catalyzes the transfer of the phosphoenolpyruvate moiety from enoylpyruvoyl-2-diphospho-5'-guanosine (EPPG) to 7,8-didemethyl-8- hydroxy-5-deazariboflavin (FO) with the formation of dehydro coenzyme F420-0 and GMP.
  
    0.632
AKB12340.1
Hypothetical protein.
  
     0.498
AKB14155.1
Hypothetical protein.
 
     0.480
AKB11891.1
Hypothetical protein.
 
     0.463
AKB13454.1
Hypothetical protein.
 
     0.458
AKB12259.1
Hypothetical protein.
 
   
 0.430
AKB12696.1
Hypothetical protein.
 
  
 0.416
AKB13435.1
Hypothetical protein.
 
     0.416
AKB12746.1
Pantoate kinase, archaeal.
  
    0.415
AKB11945.1
Putative carboxyl-terminal-processing protease, deltaproteobacterial.
  
     0.403
Your Current Organism:
Methanosarcina thermophila
NCBI taxonomy Id: 523844
Other names: M. thermophila TM-1, Methanosarcina thermophila OCM 12, Methanosarcina thermophila TM-1, Methanosarcina thermophila str. TM-1, Methanosarcina thermophila strain TM-1
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