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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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co-expression
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gene co-occurrence
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[Homology]
Score
AKB13917.1FmdE, Molybdenum formylmethanofuran dehydrogenase operon. (194 aa)    
Predicted Functional Partners:
ftr
Formylmethanofuran--tetrahydromethanopterin N-formyltransferase; Catalyzes the reversible transfer of a formyl group from formylmethanofuran (formyl-MFR) to tetrahydromethanopterin (H(4)MPT) so as to produce 5-formyl tetrahydromethanopterin (5-formyl-H(4)MPT) and methanofuran (MFR); Belongs to the FTR family.
     
 0.908
AKB13259.1
Additional substrate-specific component NikN of nickel ECF transporter.
 
    0.880
AKB13918.1
Hypothetical protein.
 
     0.861
AKB13096.1
Iron(III) dicitrate-binding protein.
 
    0.822
AKB13258.1
Substrate-specific component NikM of nickel ECF transporter.
  
    0.806
AKB11886.1
Carbon monoxide dehydrogenase CooS subunit.
  
  
  0.791
AKB13097.1
Iron(III) dicitrate transport system permease protein.
 
    0.732
AKB11885.1
CO dehydrogenase iron-sulfur protein CooF.
  
  
  0.695
AKB13098.1
Iron(III) dicitrate transport ATP-binding protein.
 
    0.678
cdhA
CO dehydrogenase/acetyl-CoA synthase subunit alpha, CO dehydrogenase subcomplex; Part of the ACDS complex that catalyzes the reversible cleavage of acetyl-CoA, allowing growth on acetate as sole source of carbon and energy. The alpha-epsilon subcomponent functions as a carbon monoxide dehydrogenase.
     
 0.664
Your Current Organism:
Methanosarcina thermophila
NCBI taxonomy Id: 523844
Other names: M. thermophila TM-1, Methanosarcina thermophila OCM 12, Methanosarcina thermophila TM-1, Methanosarcina thermophila str. TM-1, Methanosarcina thermophila strain TM-1
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