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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKB13991.1Pyruvate carboxyl transferase subunit B. (572 aa)    
Predicted Functional Partners:
AKB13992.1
Pyruvate carboxyl transferase subunit A.
 
 
 0.999
AKB13041.1
Malate dehydrogenase; Belongs to the LDH/MDH superfamily.
    
 0.945
AKB11942.1
Phosphoenolpyruvate synthase; Catalyzes the phosphorylation of pyruvate to phosphoenolpyruvate; Belongs to the PEP-utilizing enzyme family.
   
 
 0.930
AKB13880.1
Pyruvate,phosphate dikinase.
   
 
 0.930
ppcA
Phosphoenolpyruvate carboxylase, archaeal; Catalyzes the irreversible beta-carboxylation of phosphoenolpyruvate (PEP) to form oxaloacetate (OAA), a four-carbon dicarboxylic acid source for the tricarboxylic acid cycle. Belongs to the PEPCase type 2 family.
     
 0.928
AKB14072.1
Pyruvate kinase; Belongs to the pyruvate kinase family.
  
 
 0.927
AKB13603.1
Pyruvate:ferredoxin oxidoreductase, gamma subunit.
  
 
 0.922
AKB14283.1
2-oxoglutarate oxidoreductase, beta subunit.
  
 
 0.922
AKB12519.1
Pyruvate:ferredoxin oxidoreductase, beta subunit.
  
 
 0.921
AKB13600.1
Pyruvate:ferredoxin oxidoreductase, beta subunit.
  
 
 0.921
Your Current Organism:
Methanosarcina thermophila
NCBI taxonomy Id: 523844
Other names: M. thermophila TM-1, Methanosarcina thermophila OCM 12, Methanosarcina thermophila TM-1, Methanosarcina thermophila str. TM-1, Methanosarcina thermophila strain TM-1
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