Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
AKB14023.1Endonuclease III. (175 aa)    
Predicted Functional Partners:
AKB14022.1
ADP-ribosylglycohydrolase.
       0.646
AKB14024.1
Metallo-beta-lactamase family protein.
 
     0.554
AKB13553.1
Metallo-beta-lactamase.
       0.541
AKB13284.1
Hypothetical protein.
 
     0.539
AKB13285.1
Putative methanogenesis marker protein 17.
 
     0.530
AKB13283.1
Putative methanogenesis marker protein 5.
 
     0.527
AKB13286.1
Putative methanogenesis marker protein 7.
       0.457
AKB11813.1
B12-binding domain/radical SAM domain protein, family.
  
     0.433
AKB13282.1
Hypothetical protein.
 
     0.421
Your Current Organism:
Methanosarcina thermophila
NCBI taxonomy Id: 523844
Other names: M. thermophila TM-1, Methanosarcina thermophila OCM 12, Methanosarcina thermophila TM-1, Methanosarcina thermophila str. TM-1, Methanosarcina thermophila strain TM-1
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