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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKB14133.1Hypothetical protein. (292 aa)    
Predicted Functional Partners:
AKB13904.1
Biotin synthase-related enzyme.
 
     0.747
AKB11855.1
Biotin synthase-related enzyme.
 
     0.741
AKB12558.1
Biotin synthase-related enzyme.
 
     0.728
AKB11932.1
OB-fold nucleic acid binding domain protein.
 
     0.696
AKB13287.1
Alkylhydroperoxidase AhpD family core domain protein.
  
     0.691
AKB12184.1
Putative phosphoglycerate mutase.
  
     0.664
AKB14131.1
Oligosaccharyl transferase.
 
     0.659
AKB12115.1
PUA-PAPS reductase like fusion.
  
     0.618
AKB13312.1
Putative carboxyl-terminal-processing protease, deltaproteobacterial.
  
     0.617
AKB14009.1
DUF447 family protein.
 
     0.617
Your Current Organism:
Methanosarcina thermophila
NCBI taxonomy Id: 523844
Other names: M. thermophila TM-1, Methanosarcina thermophila OCM 12, Methanosarcina thermophila TM-1, Methanosarcina thermophila str. TM-1, Methanosarcina thermophila strain TM-1
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