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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKB14237.1Glycosyltransferase. (364 aa)    
Predicted Functional Partners:
AKB14236.1
Hypothetical protein.
 
  
 0.679
AKB13458.1
UDP-glucose dehydrogenase.
 
  
 0.532
AKB14235.1
SAM-dependent methyltransferase.
 
 
 
 0.486
AKB13434.1
UDP-glucose 4-epimerase.
 
  
 0.454
AKB14127.1
Glycosyltransferase.
 
  
 0.438
AKB14238.1
Glycosyltransferase.
 
  
 0.427
AKB14126.1
Putative N-acetylgalactosaminyl-diphosphoundecaprenol glucuronosyltransferase.
 
   
 0.425
AKB13060.1
Glycosyltransferase.
 
  
 0.422
AKB13456.1
UDP-glucose 4-epimerase.
 
  
 0.409
AKB14230.1
ABC transporter.
 
  
 0.409
Your Current Organism:
Methanosarcina thermophila
NCBI taxonomy Id: 523844
Other names: M. thermophila TM-1, Methanosarcina thermophila OCM 12, Methanosarcina thermophila TM-1, Methanosarcina thermophila str. TM-1, Methanosarcina thermophila strain TM-1
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