STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000376965_00374Unannotated protein. (159 aa)    
Predicted Functional Partners:
GCA_000376965_00375
Unannotated protein.
       0.610
GCA_000376965_01185
Unannotated protein.
 
    0.463
GCA_000376965_00377
Unannotated protein.
       0.408
GCA_000376965_00376
Unannotated protein.
       0.407
Your Current Organism:
Methanothermococcus thermolithotrophicus
NCBI taxonomy Id: 523845
Other names: M. thermolithotrophicus DSM 2095, Methanothermococcus thermolithotrophicus ATCC 35097, Methanothermococcus thermolithotrophicus DSM 2095, Methanothermococcus thermolithotrophicus JCM 10549, Methanothermococcus thermolithotrophicus SN-1, Methanothermococcus thermolithotrophicus str. DSM 2095, Methanothermococcus thermolithotrophicus strain DSM 2095
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.