STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000376965_01233Unannotated protein. (168 aa)    
Predicted Functional Partners:
GCA_000376965_01232
Unannotated protein.
  
    0.935
GCA_000376965_00595
Unannotated protein.
  
  
 0.701
GCA_000376965_00465
Unannotated protein.
 
  
 0.680
GCA_000376965_01706
Unannotated protein.
 
    0.678
GCA_000376965_01707
Unannotated protein.
  
    0.674
GCA_000376965_01705
Unannotated protein.
 
    0.606
GCA_000376965_00436
Unannotated protein.
  
 
 0.598
GCA_000376965_01234
Unannotated protein.
 
  
 0.580
GCA_000376965_01492
Unannotated protein.
  
    0.580
GCA_000376965_00383
Unannotated protein.
 
    0.578
Your Current Organism:
Methanothermococcus thermolithotrophicus
NCBI taxonomy Id: 523845
Other names: M. thermolithotrophicus DSM 2095, Methanothermococcus thermolithotrophicus ATCC 35097, Methanothermococcus thermolithotrophicus DSM 2095, Methanothermococcus thermolithotrophicus JCM 10549, Methanothermococcus thermolithotrophicus SN-1, Methanothermococcus thermolithotrophicus str. DSM 2095, Methanothermococcus thermolithotrophicus strain DSM 2095
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.