STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000376965_01584Unannotated protein. (376 aa)    
Predicted Functional Partners:
GCA_000376965_01583
Unannotated protein.
       0.964
GCA_000376965_01582
Unannotated protein.
       0.906
GCA_000376965_00387
Unannotated protein.
   
    0.879
GCA_000376965_01393
Unannotated protein.
   
    0.879
GCA_000376965_00216
Unannotated protein.
      
 0.618
GCA_000376965_00366
Unannotated protein.
      
 0.615
GCA_000376965_01223
Unannotated protein.
      
 0.615
GCA_000376965_00165
Unannotated protein.
      
 0.609
GCA_000376965_01222
Unannotated protein.
      
 0.609
GCA_000376965_01249
Unannotated protein.
   
    0.597
Your Current Organism:
Methanothermococcus thermolithotrophicus
NCBI taxonomy Id: 523845
Other names: M. thermolithotrophicus DSM 2095, Methanothermococcus thermolithotrophicus ATCC 35097, Methanothermococcus thermolithotrophicus DSM 2095, Methanothermococcus thermolithotrophicus JCM 10549, Methanothermococcus thermolithotrophicus SN-1, Methanothermococcus thermolithotrophicus str. DSM 2095, Methanothermococcus thermolithotrophicus strain DSM 2095
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.