STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Mfer_0542Protein of unknown function DUF2097; COGs: COG4013 conserved hypothetical protein; InterPro IPR019208; KEGG: mth:MTH1568 hypothetical protein; PFAM: Protein of unknown function DUF2097; SPTR: O27610 Putative uncharacterized protein; PFAM: Uncharacterized protein conserved in archaea (DUF2097). (92 aa)    
Predicted Functional Partners:
Mfer_0540
Protein of unknown function DUF87; COGs: COG0433 ATPase; InterPro IPR002789; KEGG: mth:MTH542 hypothetical protein; PFAM: protein of unknown function DUF87; SPTR: B5IC78 Conserved domain protein, putative; PFAM: Domain of unknown function DUF87.
       0.530
Mfer_0541
NurA domain protein; InterPro IPR018977; KEGG: mth:MTH543 hypothetical protein; PFAM: NurA domain; SPTR: O26643 Putative uncharacterized protein; PFAM: NurA domain.
       0.530
Mfer_1164
COGs: COG2218 Formylmethanofuran dehydrogenase subunit C; InterPro IPR012048: IPR002489: IPR009010: IPR006657: IPR 017550; KEGG: mth:MTH918 molybdenum formylmethanofuran dehydrogenase, subunit C; PFAM: glutamate synthase alpha subunit domain protein; molydopterin dinucleotide-binding region; PRIAM: Formylmethanofuran dehydrogenase; SPTR: O27002 Molybdenum-containing formylmethanofuran dehydrogenase 1 subunit C; TIGRFAM: formylmethanofuran dehydrogenase subunit C; PFAM: Molydopterin dinucleotide binding domain; GXGXG motif; TIGRFAM: formylmethanofuran dehydrogenase subunit C.
       0.493
Your Current Organism:
Methanothermus fervidus
NCBI taxonomy Id: 523846
Other names: M. fervidus DSM 2088, Methanothermus fervidus ATCC 43054, Methanothermus fervidus DSM 2088, Methanothermus fervidus V24S, Methanothermus fervidus str. DSM 2088, Methanothermus fervidus strain DSM 2088
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.