STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Mfer_0548KEGG: mth:MTH1295 hypothetical protein; SPTR: O27354 Putative uncharacterized protein. (137 aa)    
Predicted Functional Partners:
Mfer_0549
KEGG: mth:MTH1294 hypothetical protein; SPTR: O27353 Putative uncharacterized protein.
       0.876
Mfer_0550
InterPro IPR016027: IPR004365; KEGG: msi:Msm_0647 RNA-binding protein; PFAM: nucleic acid binding OB-fold tRNA/helicase-type; SPTR: B9AGD7 Putative uncharacterized protein; PFAM: OB-fold nucleic acid binding domain.
       0.726
Mfer_0551
KEGG: mth:MTH1583 hypothetical protein; SPTR: Q7LYP9 Conserved protein; PFAM: Oligosaccharyl transferase STT3 subunit.
       0.726
Mfer_0547
COGs: COG1109 Phosphomannomutase; InterPro IPR016066: IPR005841: IPR016055: IPR005844: IPR 005845: IPR005846: IPR005843; KEGG: mth:MTH1584 phosphomannomutase; PFAM: phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain I; phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain II; phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain III; phosphoglucomutase/phosphomannomutase; PRIAM: Phosphoglucosamine mutase; SPTR: Q50563 Phosphomannomutase; PFAM: Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II; Phosphoglucomutase/phosphomannomutase, alpha/beta/ [...]
       0.476
Mfer_0544
Mannosyl-3-phosphoglycerate synthase; InterPro IPR012812; KEGG: pab:PAB0816 hypothetical protein; PFAM: Mannosyl-3-phosphoglycerate synthase; PRIAM: Mannosyl-3-phosphoglycerate synthase; SPTR: Q9UZC1 Mannosyl-3-phosphoglycerate synthase; TIGRFAM: mannosyl-3-phosphoglycerate synthase; PFAM: Mannosyl-3-phosphoglycerate synthase (osmo_MPGsynth); TIGRFAM: mannosyl-3-phosphoglycerate synthase.
       0.461
Mfer_0545
Mannosyl-3-phosphoglycerate phosphatase family; COGs: COG3769 hydrolase (HAD superfamily); InterPro IPR006379: IPR006381: IPR013200; KEGG: pmx:PERMA_1578 glucosyl-3-phosphoglycerate phosphatase; PFAM: Haloacid dehalogenase domain protein hydrolase type 3; SPTR: Q64CZ0 Mannosyl-3-phosphoglycerate phosphatase; TIGRFAM: mannosyl-3-phosphoglycerate phosphatase family; HAD-superfamily hydrolase, subfamily IIB; PFAM: haloacid dehalogenase-like hydrolase; TIGRFAM: mannosyl-3-phosphoglycerate phosphatase family; HAD-superfamily hydrolase, subfamily IIB; mannosyl-3-phosphoglycerate phosphatase.
       0.461
Mfer_0546
Glycoside hydrolase family 38; COGs: COG0383 Alpha-mannosidase; InterPro IPR011330: IPR011013: IPR000602: IPR015341: IPR 011682; KEGG: tpd:Teth39_0612 alpha-mannosidase; PFAM: glycoside hydrolase family 38; Glycoside hydrolase family 38 central region; glycosyl hydrolase 38 domain protein; SPTR: Q648D9 Alpha-mannosidase; PFAM: Glycosyl hydrolases family 38 C-terminal domain; Glycosyl hydrolases family 38 N-terminal domain; Alpha mannosidase, middle domain.
       0.461
Your Current Organism:
Methanothermus fervidus
NCBI taxonomy Id: 523846
Other names: M. fervidus DSM 2088, Methanothermus fervidus ATCC 43054, Methanothermus fervidus DSM 2088, Methanothermus fervidus V24S, Methanothermus fervidus str. DSM 2088, Methanothermus fervidus strain DSM 2088
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