STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Mfer_0931Protein of unknown function DUF61; COGs: COG2083 conserved hypothetical protein; InterPro IPR002746: IPR013838; KEGG: mth:MTH949 hypothetical protein; PFAM: Protein of unknown function DUF61; SPTR: O27030 UPF0216 protein MTH_949; PFAM: Protein of unknown function DUF61; Belongs to the UPF0216 family. (142 aa)    
Predicted Functional Partners:
Mfer_0932
KEGG: msi:Msm_0432 hypothetical protein; SPTR: A5UKA9 Putative uncharacterized protein.
       0.782
Mfer_0930
Protein of unknown function DUF201; COGs: COG2232 ATP-dependent carboligase related to biotin carboxylase; InterPro IPR016677: IPR011761: IPR003806: IPR005479; KEGG: mth:MTH947 hypothetical protein; PFAM: protein of unknown function DUF201; SPTR: O27028 Conserved protein; PFAM: ATP-grasp domain.
       0.773
Mfer_0933
Hypothetical protein; KEGG: tex:Teth514_0181 putative mutase; SPTR: B0K1P1 Phosphopentomutase.
       0.762
Mfer_0934
COGs: COG2073 Cobalamin biosynthesis protein CbiG; InterPro IPR002750; KEGG: mth:MTH1408 cobalamin biosynthesis protein G; PFAM: cobalamin (vitamin B12) biosynthesis CbiG protein; SPTR: O27459 Cobalamin biosynthesis protein G; PFAM: Cobalamin biosynthesis central region; Cobalamin synthesis G C-terminus; Cobalamin synthesis G N-terminal.
       0.669
Mfer_0935
Class II aldolase/adducin family protein; COGs: COG0235 Ribulose-5-phosphate 4-epimerase and related epimerase and aldolase; InterPro IPR001303; KEGG: msi:Msm_1270 fuculose-1-phosphate aldolase; PFAM: class II aldolase/adducin family protein; SPTR: A5UMP7 Fuculose-1-phosphate aldolase, class II aldolase/adducin family; PFAM: Class II Aldolase and Adducin N-terminal domain.
       0.669
Mfer_0929
SPTR: P27374 Cell surface glycoprotein.
       0.563
Your Current Organism:
Methanothermus fervidus
NCBI taxonomy Id: 523846
Other names: M. fervidus DSM 2088, Methanothermus fervidus ATCC 43054, Methanothermus fervidus DSM 2088, Methanothermus fervidus V24S, Methanothermus fervidus str. DSM 2088, Methanothermus fervidus strain DSM 2088
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