STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Mfer_1124Protein of unknown function DUF81; COGs: COG0730 permease; InterPro IPR002781; KEGG: kcr:Kcr_0277 permease; PFAM: protein of unknown function DUF81; SPTR: B1L3K6 Predicted permease; PFAM: Sulfite exporter TauE/SafE. (259 aa)    
Predicted Functional Partners:
Mfer_0466
Protein of unknown function DUF81; InterPro IPR002781; KEGG: mth:MTH882 hypothetical protein; PFAM: protein of unknown function DUF81; SPTR: B9AH09 Putative uncharacterized protein; PFAM: Sulfite exporter TauE/SafE.
  
     0.686
Mfer_1123
H+transporting two-sector ATPase C subunit; InterPro IPR002379: IPR000454; KEGG: mst:Msp_1139 AhaK; PFAM: H+transporting two-sector ATPase C subunit; SPTR: Q2NF83 AhaK; PFAM: ATP synthase subunit C.
       0.463
Your Current Organism:
Methanothermus fervidus
NCBI taxonomy Id: 523846
Other names: M. fervidus DSM 2088, Methanothermus fervidus ATCC 43054, Methanothermus fervidus DSM 2088, Methanothermus fervidus V24S, Methanothermus fervidus str. DSM 2088, Methanothermus fervidus strain DSM 2088
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.