STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Mfer_1128Hypothetical protein; InterPro IPR002052; KEGG: msi:Msm_1276 hypothetical protein; SPTR: B9AFR7 Putative uncharacterized protein. (267 aa)    
Predicted Functional Partners:
Mfer_1129
SNARE associated Golgi protein-like protein; COGs: COG0586 membrane-associated protein; InterPro IPR015414; KEGG: mta:Moth_0719 hypothetical protein; PFAM: SNARE associated Golgi protein; SPTR: Q2RKK2 DedA; PFAM: SNARE associated Golgi protein.
       0.773
Mfer_1127
Protein of unknown function DUF2299; COGs: COG5440 conserved hypothetical protein; InterPro IPR018747; KEGG: mth:MTH1410 hypothetical protein; PFAM: Protein of unknown function DUF2299; SPTR: O27461 Putative uncharacterized protein; PFAM: Uncharacterized conserved protein (DUF2299).
       0.746
Your Current Organism:
Methanothermus fervidus
NCBI taxonomy Id: 523846
Other names: M. fervidus DSM 2088, Methanothermus fervidus ATCC 43054, Methanothermus fervidus DSM 2088, Methanothermus fervidus V24S, Methanothermus fervidus str. DSM 2088, Methanothermus fervidus strain DSM 2088
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.