STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_001316045_00011Unannotated protein. (228 aa)    
Predicted Functional Partners:
GCA_001316045_00012
Unannotated protein.
      0.894
GCA_001316045_00673
Unannotated protein.
  
    0.889
GCA_001316045_02425
Unannotated protein.
  
 0.830
GCA_001316045_00611
Unannotated protein.
  
 
 0.815
GCA_001316045_01746
Unannotated protein.
 
 
 0.808
GCA_001316045_00610
Unannotated protein.
  
 
 0.780
GCA_001316045_00721
Unannotated protein.
  
 
 0.780
GCA_001316045_02351
Unannotated protein.
   
 0.765
GCA_001316045_01540
Unannotated protein.
  
 
 0.740
GCA_001316045_02427
Unannotated protein.
    
 0.734
Your Current Organism:
Sulfolobus metallicus
NCBI taxonomy Id: 523847
Other names: S. metallicus DSM 6482 = JCM 9184, Sulfolobus metallicus DSM 6482, Sulfolobus metallicus DSM 6482 = JCM 9184, Sulfolobus metallicus JCM 9184, Sulfolobus metallicus JCM 9184 = DSM 6482
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.