STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_001316045_00452Unannotated protein. (269 aa)    
Predicted Functional Partners:
GCA_001316045_01048
Unannotated protein.
  
 
 0.771
GCA_001316045_01049
Unannotated protein.
  
 
 0.771
GCA_001316045_03089
Unannotated protein.
  
 
 0.748
GCA_001316045_02451
Unannotated protein.
   
 
 0.700
GCA_001316045_00002
Unannotated protein.
  
     0.598
GCA_001316045_00453
Unannotated protein.
       0.567
GCA_001316045_01742
Unannotated protein.
 
    0.562
GCA_001316045_00121
Unannotated protein.
     
 0.508
GCA_001316045_01743
Unannotated protein.
  
    0.453
GCA_001316045_02211
Unannotated protein.
 
     0.451
Your Current Organism:
Sulfolobus metallicus
NCBI taxonomy Id: 523847
Other names: S. metallicus DSM 6482 = JCM 9184, Sulfolobus metallicus DSM 6482, Sulfolobus metallicus DSM 6482 = JCM 9184, Sulfolobus metallicus JCM 9184, Sulfolobus metallicus JCM 9184 = DSM 6482
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.