STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_001316045_01029Unannotated protein. (46 aa)    
Predicted Functional Partners:
GCA_001316045_01028
Unannotated protein.
 
     0.850
GCA_001316045_01027
Unannotated protein.
 
     0.819
GCA_001316045_00689
Unannotated protein.
   
    0.738
GCA_001316045_02126
Unannotated protein.
  
 
  0.635
GCA_001316045_01031
Unannotated protein.
  
 
 0.622
GCA_001316045_00920
Unannotated protein.
   
 
 0.556
GCA_001316045_01326
Unannotated protein.
   
 
 0.556
GCA_001316045_01026
Unannotated protein.
       0.550
GCA_001316045_01812
Unannotated protein.
  
    0.544
GCA_001316045_02007
Unannotated protein.
   
  
 0.543
Your Current Organism:
Sulfolobus metallicus
NCBI taxonomy Id: 523847
Other names: S. metallicus DSM 6482 = JCM 9184, Sulfolobus metallicus DSM 6482, Sulfolobus metallicus DSM 6482 = JCM 9184, Sulfolobus metallicus JCM 9184, Sulfolobus metallicus JCM 9184 = DSM 6482
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.