Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
OCC_05811 | OCC_05816 | OCC_05811 | OCC_05816 | Iron-molybdenum cofactor-binding protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. | Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. | 0.539 |
OCC_05816 | OCC_05811 | OCC_05816 | OCC_05811 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. | Iron-molybdenum cofactor-binding protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. | 0.539 |
OCC_05816 | OCC_05826 | OCC_05816 | OCC_05826 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. | Glyceraldehyde-3-phosphate:ferredoxin oxidoreductase; Derived by automated computational analysis using gene prediction method: GeneMarkS+. | 0.483 |
OCC_05816 | fbp | OCC_05816 | OCC_05821 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. | Fructose-1 6-bisphosphatase; Catalyzes two subsequent steps in gluconeogenesis: the aldol condensation of dihydroxyacetone phosphate (DHAP) and glyceraldehyde-3- phosphate (GA3P) to fructose-1,6-bisphosphate (FBP), and the dephosphorylation of FBP to fructose-6-phosphate (F6P). | 0.685 |
OCC_05826 | OCC_05816 | OCC_05826 | OCC_05816 | Glyceraldehyde-3-phosphate:ferredoxin oxidoreductase; Derived by automated computational analysis using gene prediction method: GeneMarkS+. | Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. | 0.483 |
OCC_05826 | fbp | OCC_05826 | OCC_05821 | Glyceraldehyde-3-phosphate:ferredoxin oxidoreductase; Derived by automated computational analysis using gene prediction method: GeneMarkS+. | Fructose-1 6-bisphosphatase; Catalyzes two subsequent steps in gluconeogenesis: the aldol condensation of dihydroxyacetone phosphate (DHAP) and glyceraldehyde-3- phosphate (GA3P) to fructose-1,6-bisphosphate (FBP), and the dephosphorylation of FBP to fructose-6-phosphate (F6P). | 0.967 |
fbp | OCC_05816 | OCC_05821 | OCC_05816 | Fructose-1 6-bisphosphatase; Catalyzes two subsequent steps in gluconeogenesis: the aldol condensation of dihydroxyacetone phosphate (DHAP) and glyceraldehyde-3- phosphate (GA3P) to fructose-1,6-bisphosphate (FBP), and the dephosphorylation of FBP to fructose-6-phosphate (F6P). | Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. | 0.685 |
fbp | OCC_05826 | OCC_05821 | OCC_05826 | Fructose-1 6-bisphosphatase; Catalyzes two subsequent steps in gluconeogenesis: the aldol condensation of dihydroxyacetone phosphate (DHAP) and glyceraldehyde-3- phosphate (GA3P) to fructose-1,6-bisphosphate (FBP), and the dephosphorylation of FBP to fructose-6-phosphate (F6P). | Glyceraldehyde-3-phosphate:ferredoxin oxidoreductase; Derived by automated computational analysis using gene prediction method: GeneMarkS+. | 0.967 |