STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OCC_08255Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+; Belongs to the UPF0282 family. (299 aa)    
Predicted Functional Partners:
OCC_08250
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
       0.564
OCC_03703
Nucleotidyltransferase; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
  
     0.555
OCC_14370
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
 
     0.523
OCC_07601
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
  
     0.509
rpl14e
50S ribosomal protein L14; Binds 50S subunit; Derived by automated computational analysis using gene prediction method: GeneMarkS+; Belongs to the eukaryotic ribosomal protein eL14 family.
  
     0.502
OCC_12691
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
  
     0.500
nep1
16S rRNA methyltransferase; Methyltransferase involved in ribosomal biogenesis. Specifically catalyzes the N1-methylation of the pseudouridine corresponding to position 914 in M.jannaschii 16S rRNA.
 
     0.494
rpl18a
50S ribosomal protein LX; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
  
   
 0.484
OCC_04670
Hydrothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
  
     0.479
OCC_14530
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
       0.478
Your Current Organism:
Thermococcus litoralis
NCBI taxonomy Id: 523849
Other names: T. litoralis DSM 5473, Thermococcus litoralis ATCC 51850, Thermococcus litoralis DSM 5473, Thermococcus litoralis JCM 8560, Thermococcus litoralis NS-C, Thermococcus litoralis str. DSM 5473, Thermococcus litoralis strain DSM 5473
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.