STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OCC_09741CoA disulfide reductase; Derived by automated computational analysis using gene prediction method: GeneMarkS+. (441 aa)    
Predicted Functional Partners:
OCC_09746
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
       0.653
OCC_00332
Sarcosine oxidase subunit beta; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
  
 
 0.604
OCC_00352
Sarcosine oxidase subunit beta; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
  
 
 0.604
OCC_09736
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
       0.601
OCC_12046
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
 
 
 0.454
OCC_09114
Apolipoprotein N- acyltransferase; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
   
  
 0.445
OCC_09751
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
  
    0.416
rps10p
30S ribosomal protein S10; Involved in the binding of tRNA to the ribosomes. Belongs to the universal ribosomal protein uS10 family.
 
 
 0.402
Your Current Organism:
Thermococcus litoralis
NCBI taxonomy Id: 523849
Other names: T. litoralis DSM 5473, Thermococcus litoralis ATCC 51850, Thermococcus litoralis DSM 5473, Thermococcus litoralis JCM 8560, Thermococcus litoralis NS-C, Thermococcus litoralis str. DSM 5473, Thermococcus litoralis strain DSM 5473
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