STRINGSTRING
rpl12 protein (Thermococcus onnurineus) - STRING interaction network
"rpl12" - 50S ribosomal protein L12 in Thermococcus onnurineus
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
rpl1250S ribosomal protein L12; Forms part of the ribosomal stalk, playing a central role in the interaction of the ribosome with GTP-bound translation factors (105 aa)    
Predicted Functional Partners:
rpl11
50S ribosomal protein L11; Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors (163 aa)
   
  0.999
rpl31e
50S ribosomal protein L31e (91 aa)
 
  0.999
rpl10
Acidic ribosomal protein P0; Forms part of the ribosomal stalk, playing a central role in the interaction of the ribosome with GTP-bound translation factors (339 aa)
   
  0.999
rpl19e
50S ribosomal protein L19e; Binds to the 23S rRNA (148 aa)
     
  0.999
rpl18e
50S ribosomal protein L18e (120 aa)
   
  0.999
rps27e
30S ribosomal protein S27e (65 aa)
   
  0.999
rpl18
50S ribosomal protein L18; This is one of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance (201 aa)
   
  0.999
rps3ae
30S ribosomal protein S3Ae (200 aa)
   
  0.999
TON_0649
50S ribosomal protein L35 (88 aa)
   
  0.999
rpl29p
50S ribosomal protein L29 (66 aa)
     
  0.999
Your Current Organism:
Thermococcus onnurineus
NCBI taxonomy Id: 523850
Other names: T. onnurineus, T. onnurineus NA1, Thermococcus onnurineus, Thermococcus onnurineus NA1, Thermococcus onnurineus str. NA1, Thermococcus onnurineus strain NA1, Thermococcus sp. NA1
Server load: low (8%) [HD]