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rps15 protein (Thermococcus onnurineus) - STRING interaction network
"rps15" - 30S ribosomal protein S15 in Thermococcus onnurineus
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
rps1530S ribosomal protein S15 (151 aa)    
Predicted Functional Partners:
rps3
(rps3P); Binds the lower part of the 30S subunit head (208 aa)
 
  0.999
rps3ae
30S ribosomal protein S3Ae (200 aa)
 
  0.999
rpl18
50S ribosomal protein L18; This is one of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance (201 aa)
 
  0.999
rpl23p
(rpl23P); Binds to 23S rRNA. One of the proteins that surrounds the polypeptide exit tunnel on the outside of the ribosome (86 aa)
     
  0.999
rps4e
30S ribosomal protein S4e (243 aa)
   
  0.999
rps19e
30S ribosomal protein S19e; May be involved in maturation of the 30S ribosomal subunit (150 aa)
   
  0.999
rps5
30S ribosomal protein S5; With S4 and S12 plays an important role in translational accuracy (235 aa)
 
  0.999
rpl29p
50S ribosomal protein L29 (66 aa)
     
  0.999
rps6e
30S ribosomal protein S6e (125 aa)
 
  0.999
rps17e
30S ribosomal protein S17e (67 aa)
 
  0.999
Your Current Organism:
Thermococcus onnurineus
NCBI taxonomy Id: 523850
Other names: T. onnurineus, T. onnurineus NA1, Thermococcus onnurineus, Thermococcus onnurineus NA1, Thermococcus onnurineus str. NA1, Thermococcus onnurineus strain NA1, Thermococcus sp. NA1
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