Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
TON_0909Hypothetical membrane protein, conserved. (218 aa)    
Predicted Functional Partners:
TON_0906
Hypothetical protein.
 
     0.978
TON_0905
cstA; Carbon starvation protein A.
 
     0.956
TON_0907
Hypothetical arsA; Arsenical pump-driving ATPase (arsenite-translocating ATPase) (arsenical resistance ATPase).
 
     0.955
TON_0908
Hypothetical protein.
       0.918
TON_0910
Lysophospholipase; Alpha/beta hydrolase superfamily.
       0.865
TON_0904
Oxaloacetate decarboxylase, alpha subunit.
       0.756
TON_0903
Fructose-1,6-bisphosphate aldolase.
 
     0.620
Your Current Organism:
Thermococcus onnurineus
NCBI taxonomy Id: 523850
Other names: T. onnurineus NA1, Thermococcus onnurineus NA1, Thermococcus onnurineus str. NA1, Thermococcus onnurineus strain NA1
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