Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
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Co-occurrence
Co-expression
Experiments
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[Homology]
Score
TON_0983ABC-type iron(III) transport system, periplasmic component. (483 aa)    
Predicted Functional Partners:
TON_0984
ABC-type iron(III) transport system, permease component.
 
 
 0.996
TON_0985
ABC-type iron(III) transport system, ATPase component.
 
  
  0.972
TON_0982
Hypothetical protein, conserved.
     
 0.879
TON_0986
Hypothetical protein, conserved; DUF447 family.
       0.829
TON_1959
ABC-type iron(III) transport system, permease component.
 
  
 0.810
tyrS
tyrosyl-tRNA synthetase; Catalyzes the attachment of tyrosine to tRNA(Tyr) in a two- step reaction: tyrosine is first activated by ATP to form Tyr-AMP and then transferred to the acceptor end of tRNA(Tyr); Belongs to the class-I aminoacyl-tRNA synthetase family. TyrS type 4 subfamily.
 
   
 0.804
TON_0987
Metallophosphoesterase; Calcineurin superfamily.
       0.797
TON_0980
Transcription regulator; Lrp/AsnC family.
     
 0.573
TON_0988
Hypothetical protein, conserved.
       0.446
TON_1764
ABC-type dipeptide/oligopeptide transport system; Probable periplasmic component.
  
     0.430
Your Current Organism:
Thermococcus onnurineus
NCBI taxonomy Id: 523850
Other names: T. onnurineus NA1, Thermococcus onnurineus NA1, Thermococcus onnurineus str. NA1, Thermococcus onnurineus strain NA1
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