STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TON_1660Alpha-amylase. (458 aa)    
Predicted Functional Partners:
TON_1796
Cyclomaltodextrinase.
  
  
 0.943
TON_1716
4-alpha-Glucanotransferase; GH57 family.
     
 0.914
TON_0153
Hypothetical alpha-amylase; GH57 family; Belongs to the glycosyl hydrolase 57 family.
  
  
  0.912
TON_0191
Maltodextrin phosphorylase.
     
  0.900
TON_1661
Transcription regulator; ArsR family.
       0.507
TON_1662
Hypothetical protein.
       0.502
TON_1663
Transcription regulator; ArsR family.
       0.464
TON_1451
Cyclomaltodextrin glucanotransferase.
 
   
 0.436
TON_1664
Cation transporter.
 
     0.408
Your Current Organism:
Thermococcus onnurineus
NCBI taxonomy Id: 523850
Other names: T. onnurineus NA1, Thermococcus onnurineus NA1, Thermococcus onnurineus str. NA1, Thermococcus onnurineus strain NA1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.