STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TON_1966tRNA/rRNA cytosine-C5-methylase; NOL1/NOP2/Sun family, fused to N-terminal NusB regulator domain; Belongs to the class I-like SAM-binding methyltransferase superfamily. RsmB/NOP family. (450 aa)    
Predicted Functional Partners:
TON_1672
GTPase; MMR1/HSR1 family.
 
 
 0.719
TON_1737
Hypothetical protein, conserved; UPF0113 family.
  
 
 0.698
TON_1299
snoRNP component; Nop56p/58p-like protein.
   
 
 0.686
TON_0356
Predicted GTPase; Containing NOG1 domain.
   
 
 0.674
rpl35ae
LSU ribosomal protein L35AE; Belongs to the eukaryotic ribosomal protein eL33 family.
  
 
   0.655
rps8e
SSU ribosomal protein S8E.
   
 
 0.640
rpl10
LSU ribosomal protein L10E; Forms part of the ribosomal stalk, playing a central role in the interaction of the ribosome with GTP-bound translation factors. Belongs to the universal ribosomal protein uL10 family.
  
 
 0.627
TON_0453
Component of the U3 small nucleolar ribonucleoprotein; Probably involved in the biogenesis of the ribosome.
   
 
 0.624
rpl7ae
LSU ribosomal protein L7AE; Multifunctional RNA-binding protein that recognizes the K- turn motif in ribosomal RNA, the RNA component of RNase P, box H/ACA, box C/D and box C'/D' sRNAs.
 
 
 0.624
rpl30
LSU ribosomal protein L30P.
   
 
 0.611
Your Current Organism:
Thermococcus onnurineus
NCBI taxonomy Id: 523850
Other names: T. onnurineus NA1, Thermococcus onnurineus NA1, Thermococcus onnurineus str. NA1, Thermococcus onnurineus strain NA1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.