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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFK38798.1HPt (histidine-containing phosphotransfer) domain-containing protein. (131 aa)    
Predicted Functional Partners:
SFK11868.1
PAS domain S-box-containing protein.
 
 0.999
SFK38761.1
Response regulator receiver modulated diguanylate cyclase.
  
 0.999
SFK72069.1
Diguanylate cyclase (GGDEF) domain-containing protein.
  
 0.999
SFK86702.1
Signal transduction histidine kinase.
 
0.999
SFK90720.1
Diguanylate cyclase (GGDEF) domain-containing protein.
 
 0.999
SFL10352.1
Response regulator receiver domain-containing protein.
  
 0.999
SFL13981.1
Chemosensory pili system protein ChpA (sensor histidine kinase/response regulator).
  
 0.999
SFL41732.1
PAS domain S-box-containing protein.
 
 0.999
SFL44399.1
Response regulator receiver domain-containing protein.
  
 0.999
SFK28957.1
PAS domain S-box-containing protein.
 
 0.998
Your Current Organism:
Nitrosomonas aestuarii
NCBI taxonomy Id: 52441
Other names: Nitrosomonas aestuarii Koops et al. 2001, strain Nm 36
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