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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFK46576.1Phospholipid transport system transporter-binding protein. (101 aa)    
Predicted Functional Partners:
SFK46556.1
Phospholipid transport system substrate-binding protein.
  
 
 0.991
SFK46533.1
phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein.
  
 0.977
SFK46485.1
phospholipid/cholesterol/gamma-HCH transport system ATP-binding protein.
  
 0.975
SFK46508.1
phospholipid/cholesterol/gamma-HCH transport system permease protein.
  
 0.973
SFL25177.1
Phospholipid transport system substrate-binding protein.
  
 
 0.971
SFK84669.1
phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein.
 
 0.947
SFK84641.1
phospholipid/cholesterol/gamma-HCH transport system ATP-binding protein.
  
 0.943
SFK84610.1
phospholipid/cholesterol/gamma-HCH transport system permease protein.
  
 0.936
SFK46602.1
ABC-2 type transport system ATP-binding protein.
       0.758
SFK46627.1
ABC-2 type transport system permease protein.
       0.758
Your Current Organism:
Nitrosomonas aestuarii
NCBI taxonomy Id: 52441
Other names: Nitrosomonas aestuarii Koops et al. 2001, strain Nm 36
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.