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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFK46627.1ABC-2 type transport system permease protein. (251 aa)    
Predicted Functional Partners:
SFK46602.1
ABC-2 type transport system ATP-binding protein.
 
 0.989
SFK86791.1
Protein of unknown function.
  
  
 0.762
SFK46576.1
Phospholipid transport system transporter-binding protein.
       0.758
SFK46556.1
Phospholipid transport system substrate-binding protein.
 
     0.719
SFL40035.1
Ribosome-dependent ATPase.
  
 
 0.719
SFK46508.1
phospholipid/cholesterol/gamma-HCH transport system permease protein.
    
  0.708
SFL01205.1
ABC-2 type transport system ATP-binding protein.
 
 
 0.707
SFK79397.1
Lipopolysaccharide transport system permease protein.
    
  0.633
SFL39678.1
Ribosome-dependent ATPase.
  
 
 0.579
SFK46533.1
phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein.
       0.562
Your Current Organism:
Nitrosomonas aestuarii
NCBI taxonomy Id: 52441
Other names: Nitrosomonas aestuarii Koops et al. 2001, strain Nm 36
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