Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
SFK68798.1Putative ABC transport system ATP-binding protein. (252 aa)    
Predicted Functional Partners:
SFK68849.1
Putative ABC transport system permease protein.
 0.995
SFK22078.1
Putative ABC transport system permease protein.
 0.986
SFK22101.1
Putative ABC transport system permease protein.
 0.983
SFK68772.1
HlyD family secretion protein; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
 
 
 0.962
SFK48834.1
Lipoprotein-releasing system permease protein.
  
 0.915
SFK68748.1
Hypothetical protein.
       0.709
pstB-3
Phosphate ABC transporter ATP-binding protein, PhoT family; Part of the ABC transporter complex PstSACB involved in phosphate import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. Phosphate importer (TC 3.A.1.7) family.
 
  
0.672
SFK69089.1
Putative ABC transport system permease protein.
  
 0.661
SFK68827.1
Hypothetical protein.
       0.558
SFK73745.1
Outer membrane lipoprotein-sorting protein.
   
 
 0.555
Your Current Organism:
Nitrosomonas aestuarii
NCBI taxonomy Id: 52441
Other names: Nitrosomonas aestuarii Koops et al. 2001, strain Nm 36
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