close STRING v12.5 is now available!
The next version of STRING is ready for use in your analyses: updated networks across STRING • newly available directed regulatory networks • a new typed view showing functional, physical, and regulatory edges in one network • new clustering options and cluster-based layouts • … and much more!
Explore STRING v12.5 →
STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFK71763.1Cytochrome c peroxidase. (316 aa)    
Predicted Functional Partners:
SFK37973.1
DNA-binding beta-propeller fold protein YncE.
  
 
 0.955
SFL42999.1
Hypothetical protein.
  
 
 0.955
SFK38126.1
Hypothetical protein.
  
 
 0.946
SFK60938.1
Component of the Tol biopolymer transport system.
 
 
 0.633
SFK13002.1
WD domain-containing protein, G-beta repeat-containing protein.
  
   0.560
tolB
TolB protein; Part of the Tol-Pal system, which plays a role in outer membrane invagination during cell division and is important for maintaining outer membrane integrity.
  
   0.550
SFK71792.1
3-oxoacyl-[acyl-carrier protein] reductase.
  
    0.469
SFL40110.1
EF hand.
    
  0.437
Your Current Organism:
Nitrosomonas aestuarii
NCBI taxonomy Id: 52441
Other names: Nitrosomonas aestuarii Koops et al. 2001, strain Nm 36
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.