Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SFL95808.1 | SFL95866.1 | SAMN05421880_10324 | SAMN05421880_10326 | Inorganic triphosphatase YgiF, contains CYTH and CHAD domains. | Fe-S cluster biosynthesis and repair protein YggX; Could be a mediator in iron transactions between iron acquisition and iron-requiring processes, such as synthesis and/or repair of Fe-S clusters in biosynthetic enzymes. | 0.594 |
SFL95808.1 | SFM79337.1 | SAMN05421880_10324 | SAMN05421880_13417 | Inorganic triphosphatase YgiF, contains CYTH and CHAD domains. | Hypothetical protein. | 0.413 |
SFL95808.1 | ppk1 | SAMN05421880_10324 | SAMN05421880_10325 | Inorganic triphosphatase YgiF, contains CYTH and CHAD domains. | Polyphosphate kinase; Catalyzes the reversible transfer of the terminal phosphate of ATP to form a long-chain polyphosphate (polyP). Belongs to the polyphosphate kinase 1 (PPK1) family. | 0.758 |
SFL95866.1 | SFL95808.1 | SAMN05421880_10326 | SAMN05421880_10324 | Fe-S cluster biosynthesis and repair protein YggX; Could be a mediator in iron transactions between iron acquisition and iron-requiring processes, such as synthesis and/or repair of Fe-S clusters in biosynthetic enzymes. | Inorganic triphosphatase YgiF, contains CYTH and CHAD domains. | 0.594 |
SFL95866.1 | ppk1 | SAMN05421880_10326 | SAMN05421880_10325 | Fe-S cluster biosynthesis and repair protein YggX; Could be a mediator in iron transactions between iron acquisition and iron-requiring processes, such as synthesis and/or repair of Fe-S clusters in biosynthetic enzymes. | Polyphosphate kinase; Catalyzes the reversible transfer of the terminal phosphate of ATP to form a long-chain polyphosphate (polyP). Belongs to the polyphosphate kinase 1 (PPK1) family. | 0.670 |
SFM79337.1 | SFL95808.1 | SAMN05421880_13417 | SAMN05421880_10324 | Hypothetical protein. | Inorganic triphosphatase YgiF, contains CYTH and CHAD domains. | 0.413 |
ppk1 | SFL95808.1 | SAMN05421880_10325 | SAMN05421880_10324 | Polyphosphate kinase; Catalyzes the reversible transfer of the terminal phosphate of ATP to form a long-chain polyphosphate (polyP). Belongs to the polyphosphate kinase 1 (PPK1) family. | Inorganic triphosphatase YgiF, contains CYTH and CHAD domains. | 0.758 |
ppk1 | SFL95866.1 | SAMN05421880_10325 | SAMN05421880_10326 | Polyphosphate kinase; Catalyzes the reversible transfer of the terminal phosphate of ATP to form a long-chain polyphosphate (polyP). Belongs to the polyphosphate kinase 1 (PPK1) family. | Fe-S cluster biosynthesis and repair protein YggX; Could be a mediator in iron transactions between iron acquisition and iron-requiring processes, such as synthesis and/or repair of Fe-S clusters in biosynthetic enzymes. | 0.670 |