STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFL97417.1DNA-3-methyladenine glycosylase II. (160 aa)    
Predicted Functional Partners:
SFL97347.1
AraC family transcriptional regulator, regulatory protein of adaptative response / methylated-DNA-[protein]-cysteine methyltransferase.
 
 
 0.914
SFL97377.1
Hypothetical protein.
      0.848
SFL96427.1
Exodeoxyribonuclease-3.
   
 0.779
SFM06362.1
Exodeoxyribonuclease III.
   
 0.779
SFL97448.1
Hypothetical protein.
       0.777
polA
DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family.
   
 
 0.558
SFL97482.1
Predicted ester cyclase.
       0.487
SFM13253.1
DNA-3-methyladenine glycosylase II.
 
  
0.433
Your Current Organism:
Nitrosomonas nitrosa
NCBI taxonomy Id: 52442
Other names: N. nitrosa, Nitrosomonas nitrosa Koops et al. 2001, strain Nm 90
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.