STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFM04520.1Protein of unknown function. (162 aa)    
Predicted Functional Partners:
SFM04545.1
Cytochrome c553.
 
     0.633
SFM04567.1
Cytochrome c, mono-and diheme variants.
 
     0.630
SFM32222.1
Putative copper resistance protein D.
  
     0.521
SFM23069.1
Hypothetical protein.
  
     0.519
SFM79401.1
O-antigen ligase.
  
     0.518
SFM74497.1
Putative copper resistance protein D.
  
     0.515
SFM21381.1
Outer membrane protein (porin).
  
     0.449
SFM02033.1
6-phosphogluconolactonase, cycloisomerase 2 family.
  
     0.447
SFM51919.1
FecR family protein.
  
     0.444
Your Current Organism:
Nitrosomonas nitrosa
NCBI taxonomy Id: 52442
Other names: N. nitrosa, Nitrosomonas nitrosa Koops et al. 2001, strain Nm 90
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.