STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFM19942.1Cytochrome c553. (110 aa)    
Predicted Functional Partners:
SFM10574.1
Sulfide:quinone oxidoreductase.
   
 0.923
SFM83237.1
Ubiquinol-cytochrome c reductase cytochrome c1 subunit.
 
 
 0.823
SFM04545.1
Cytochrome c553.
  
     0.773
SFM83288.1
Ubiquinol-cytochrome c reductase iron-sulfur subunit; Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis.
 
 
 0.767
SFM19909.1
Cytochrome c553.
 
   
0.763
SFM83262.1
Ubiquinol-cytochrome c reductase cytochrome b subunit; Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis.
 
 
 0.715
SFM63167.1
Uncharacterized membrane protein YckC, RDD family.
  
     0.676
SFM20186.1
Cytochrome oxidase Cu insertion factor, SCO1/SenC/PrrC family.
 
     0.636
SFM74639.1
Cytochrome c553.
  
 
  0.620
SFM20214.1
Surfeit locus 1 family protein.
  
     0.581
Your Current Organism:
Nitrosomonas nitrosa
NCBI taxonomy Id: 52442
Other names: N. nitrosa, Nitrosomonas nitrosa Koops et al. 2001, strain Nm 90
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