STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Ddes_0806L-aspartate oxidase; Catalyzes the oxidation of L-aspartate to iminoaspartate. (541 aa)    
Predicted Functional Partners:
Ddes_0807
Quinolinate synthetase complex, A subunit; Catalyzes the condensation of iminoaspartate with dihydroxyacetone phosphate to form quinolinate.
 
 0.999
Ddes_0808
KEGG: dvl:Dvul_1353 nicotinate-nucleotide pyrophosphorylase; TIGRFAM: nicotinate-nucleotide pyrophosphorylase; PFAM: Quinolinate phosphoribosyl transferase; Belongs to the NadC/ModD family.
  
 0.997
Ddes_2339
PFAM: Asparaginase/glutaminase; KEGG: bxe:Bxe_A2464 L-asparaginase, type II.
   
 
 0.914
purA
Adenylosuccinate synthase; Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP; Belongs to the adenylosuccinate synthetase family.
     
 0.912
argG
PFAM: argininosuccinate synthase; KEGG: dvu:DVU1095 argininosuccinate synthase; Belongs to the argininosuccinate synthase family. Type 1 subfamily.
     
 0.911
Ddes_0351
TIGRFAM: aspartate racemase; PFAM: Asp/Glu/hydantoin racemase; KEGG: csa:Csal_0199 aspartate racemase; Belongs to the aspartate/glutamate racemases family.
     
  0.900
Ddes_1020
TIGRFAM: aspartate racemase; PFAM: Asp/Glu/hydantoin racemase; KEGG: hhe:HH0075 aspartate racemase.
     
  0.900
pyrB
TIGRFAM: aspartate carbamoyltransferase; PFAM: aspartate/ornithine carbamoyltransferase Asp/Orn-binding region; aspartate/ornithine carbamoyltransferase carbamoyl-P binding domain; KEGG: dvl:Dvul_0464 aspartate carbamoyltransferase catalytic subunit; Belongs to the aspartate/ornithine carbamoyltransferase superfamily. ATCase family.
     
 0.900
Ddes_2055
KEGG: hau:Haur_3584 asparagine synthase (glutamine-hydrolyzing); TIGRFAM: asparagine synthase (glutamine-hydrolyzing); PFAM: glutamine amidotransferase class-II; asparagine synthase.
     
  0.900
Ddes_1726
TIGRFAM: modD protein; PFAM: Quinolinate phosphoribosyl transferase; KEGG: cch:Cag_0412 putative molybdenum utilization protein ModD; Belongs to the NadC/ModD family.
 
  
 0.896
Your Current Organism:
Desulfovibrio desulfuricans ATCC 27774
NCBI taxonomy Id: 525146
Other names: D. desulfuricans ATCC 27774, Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774
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