STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Ddes_1819KEGG: dvl:Dvul_1578 hypothetical protein. (154 aa)    
Predicted Functional Partners:
Ddes_1822
PFAM: protein of unknown function DUF224 cysteine-rich region domain protein; KEGG: dps:DP0269 Fe-S oxidoreductase.
 
     0.955
Ddes_1816
SMART: metal-dependent phosphohydrolase HD region; KEGG: gur:Gura_1006 metal dependent phosphohydrolase.
 
     0.954
Ddes_1818
PFAM: Radical SAM domain protein; KEGG: pth:PTH_0684 Fe-S oxidoreductases.
 
     0.951
Ddes_1821
KEGG: pth:PTH_0681 hypothetical protein.
 
     0.951
Ddes_1817
KEGG: pca:Pcar_0226 coenzyme F390 synthetase.
 
    0.945
Ddes_1820
PFAM: Methyltransferase type 11; Methyltransferase type 12; KEGG: dvl:Dvul_1577 methyltransferase type 11.
 
    0.924
Ddes_1823
PFAM: aldehyde oxidase and xanthine dehydrogenase a/b hammerhead; ferredoxin; [2Fe-2S]-binding domain protein; aldehyde oxidase and xanthine dehydrogenase molybdopterin binding; KEGG: dvl:Dvul_1574 aldehyde oxidase and xanthine dehydrogenase, molybdopterin binding.
 
     0.888
Ddes_0305
PFAM: protein of unknown function DUF182; KEGG: pth:PTH_0686 xanthine and CO dehydrogenases maturation factor.
 
     0.728
Ddes_0320
KEGG: glo:Glov_1444 protein of unknown function DUF169.
  
     0.584
Ddes_1815
PFAM: Phosphoglycerate mutase; KEGG: pth:PTH_0689 fructose-2,6-bisphosphatase.
 
     0.582
Your Current Organism:
Desulfovibrio desulfuricans ATCC 27774
NCBI taxonomy Id: 525146
Other names: D. desulfuricans ATCC 27774, Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774
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