STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Ddes_1943PFAM: iron-containing alcohol dehydrogenase; KEGG: dvl:Dvul_0825 iron-containing alcohol dehydrogenase. (399 aa)    
Predicted Functional Partners:
Ddes_1356
KEGG: cbt:CLH_1375 aldehyde-alcohol dehydrogenase 2.
 
 0.931
Ddes_1360
TIGRFAM: acetaldehyde dehydrogenase (acetylating); KEGG: amt:Amet_0259 acetaldehyde dehydrogenase (acetylating).
 
 0.930
Ddes_1981
PFAM: Aldehyde Dehydrogenase; KEGG: cbe:Cbei_0729 aldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family.
 
 0.923
Ddes_0298
PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; pyruvate ferredoxin/flavodoxin oxidoreductase; pyruvate flavodoxin/ferredoxin oxidoreductase domain protein; 4Fe-4S ferredoxin, iron-sulphur binding, conserved site; KEGG: dvl:Dvul_0348 pyruvate flavodoxin/ferredoxin oxidoreductase domain-containing protein; Belongs to the pyruvate:ferredoxin/flavodoxin oxidoreductase family.
  
  
 0.564
Ddes_0297
Phosphate acetyltransferase; Involved in acetate metabolism. In the N-terminal section; belongs to the CobB/CobQ family.
   
  
 0.562
Ddes_1875
PFAM: Hpt domain protein; KEGG: pmy:Pmen_0835 multi-sensor hybrid histidine kinase.
  
  
 0.515
Ddes_1157
PFAM: glutamate synthase alpha subunit domain protein; KEGG: ppd:Ppro_2159 glutamate synthase alpha subunit.
  
  
 0.460
cutD
Glycyl-radical enzyme activating protein family; Catalyzes activation of the choline trimethylamine-lyase CutC under anaerobic conditions by generation of an organic free radical on a glycine residue, via an homolytic cleavage of S-adenosyl-L-methionine (SAM).
  
  
 0.439
Ddes_1435
KEGG: dvl:Dvul_0490 glycyl-radical activating family protein; TIGRFAM: glycyl-radical enzyme activating protein family; PFAM: Radical SAM domain protein.
  
  
 0.414
Ddes_1076
Fe-S cluster assembly protein NifU; May be involved in the formation or repair of [Fe-S] clusters present in iron-sulfur proteins.
  
  
 0.411
Your Current Organism:
Desulfovibrio desulfuricans ATCC 27774
NCBI taxonomy Id: 525146
Other names: D. desulfuricans ATCC 27774, Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774
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