Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
Ddes_2000TIGRFAM: flagellar hook-associated protein 3; PFAM: flagellin domain protein; KEGG: lip:LI0748 flagellin-like protein. (512 aa)    
Predicted Functional Partners:
Ddes_2001
TIGRFAM: flagellar hook-associated protein FlgK; PFAM: flagellar basal body rod protein; protein of unknown function DUF1078 domain protein; KEGG: lip:LI0747 flagellar hook-associated protein; Belongs to the flagella basal body rod proteins family.
 
 
 0.998
Ddes_0530
PFAM: flagellar hook-associated protein 2 domain protein; flagellar hook-associated 2 domain protein; KEGG: dvl:Dvul_2119 flagellar hook-associated 2 domain-containing protein.
 
 
 0.996
Ddes_0529
PFAM: flagellar protein FliS; KEGG: dvl:Dvul_2120 flagellar protein FliS.
 
 
 0.992
fliW
Protein of unknown function DUF180; Acts as an anti-CsrA protein, binds CsrA and prevents it from repressing translation of its target genes, one of which is flagellin. Binds to flagellin and participates in the assembly of the flagellum.
 
 
 0.978
Ddes_1260
Flagellar hook capping protein; Required for flagellar hook formation. May act as a scaffolding protein.
 
 
 0.965
Ddes_1575
TIGRFAM: flagellar basal-body rod protein FlgC; PFAM: protein of unknown function DUF1078 domain protein; KEGG: lip:LI0859 flagellar basal body rod protein; Belongs to the flagella basal body rod proteins family.
 
  
 0.951
Ddes_1576
Flagellar basal-body rod protein FlgB; Structural component of flagellum, the bacterial motility apparatus. Part of the rod structure of flagellar basal body.
 
 
 0.945
Ddes_1261
PFAM: flagellar basal body rod protein; protein of unknown function DUF1078 domain protein; KEGG: lip:LI0566 flagellar hook protein FlgE.
 
 
 0.938
Ddes_1836
PFAM: surface presentation of antigens (SPOA) protein; flagellar motor switch protein FliM; KEGG: dvl:Dvul_2074 flagellar motor switch protein FliM.
 
  
 0.931
Ddes_0392
TIGRFAM: flagellar basal-body rod protein FlgG; flagellar basal-body rod FlgG family protein; PFAM: flagellar basal body rod protein; protein of unknown function DUF1078 domain protein; KEGG: dvl:Dvul_2428 flagellar basal body rod protein FlgG; Belongs to the flagella basal body rod proteins family.
 
 
 0.918
Your Current Organism:
Desulfovibrio desulfuricans ATCC 27774
NCBI taxonomy Id: 525146
Other names: D. desulfuricans ATCC 27774, Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774
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