STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EEH64299.1CobQ/CobB/MinD/ParA nucleotide binding domain protein; COG: COG1192; Pfam: PF01656; InterPro: IPR002586. (299 aa)    
Predicted Functional Partners:
EEH64298.1
ParB-like protein; COG: COG1475; Pfam: PF02195; InterPro: IPR004437; Belongs to the ParB family.
 
 0.999
dnaA
Chromosomal replication initiator protein DnaA; Plays an important role in the initiation and regulation of chromosomal replication. Binds to the origin of replication; it binds specifically double-stranded DNA at a 9 bp consensus (dnaA box): 5'- TTATC[CA]A[CA]A-3'. DnaA binds to ATP and to acidic phospholipids. Belongs to the DnaA family.
  
 
 0.811
gidB
16S rRNA methyltransferase GidB; Specifically methylates the N7 position of guanine in position 518 of 16S rRNA; Belongs to the methyltransferase superfamily. RNA methyltransferase RsmG family.
  
  
 0.758
EEH64733.1
Hypothetical protein.
    
   0.583
EEH64179.1
Hypothetical protein.
    
   0.583
EEH64164.1
Hypothetical protein.
    
   0.583
EEH63617.1
LPXTG-motif cell wall anchor domain protein; Pfam: PF00746.
    
   0.583
EEH63785.1
N-acetylmuramoyl-L-alanine amidase; Pfam: PF01510; InterPro: IPR002502.
    
   0.583
EEH64101.1
LPXTG-motif cell wall anchor domain protein; Pfam: PF00746.
    
   0.583
EEH63428.1
Hypothetical protein.
    
   0.583
Your Current Organism:
Gleimia coleocanis
NCBI taxonomy Id: 525245
Other names: Actinomyces coleocanis DSM 15436, Actinomyces coleocanis str. DSM 15436, Actinomyces coleocanis strain DSM 15436, G. coleocanis DSM 15436, Gleimia coleocanis DSM 15436
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.