STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EEH64464.1Glycosyl hydrolase family 20, catalytic domain protein; COG: COG3525; Pfam: PF00728; InterPro: IPR015883. (417 aa)    
Predicted Functional Partners:
EEH64462.1
ABC transporter, permease protein; COG: COG1175; Pfam: PF00528; InterPro: IPR000515.
       0.820
EEH64463.1
ABC transporter, permease protein; COG: COG0395; Pfam: PF00528; InterPro: IPR000515.
       0.808
EEH64445.1
Phosphotransferase system, EIIC; COG: COG1263; Pfam: PF02378; InterPro: IPR003352.
  
  
 0.785
EEH64094.1
Alpha-L-fucosidase; COG: COG3669; Pfam: PF01120; InterPro: IPR016286.
  
 0.782
ptbA
PTS system, glucose subfamily, IIA component; COG: COG2190; Pfam: PF00358; InterPro: IPR001127.
  
    0.726
EEH64100.1
CutC family protein; COG: COG3142; Pfam: PF03932; InterPro: IPR005627; Belongs to the CutC family.
 
     0.726
EEH63613.1
Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1; COG: COG2190; Pfam: PF00358; InterPro: IPR001127.
  
    0.726
nedA
Exo-alpha-sialidase; Pfam: PF02012.
  
 
 0.693
EEH64461.1
ABC transporter, solute-binding protein; COG: COG1653; Pfam: PF01547; InterPro: IPR006059.
 
     0.669
EEH63889.1
Beta galactosidase small chain; COG: COG3250; Pfam: PF02837,PF00703,PF02836,PF02929; InterPro: IPR014718.
 
 0.634
Your Current Organism:
Gleimia coleocanis
NCBI taxonomy Id: 525245
Other names: Actinomyces coleocanis DSM 15436, Actinomyces coleocanis str. DSM 15436, Actinomyces coleocanis strain DSM 15436, G. coleocanis DSM 15436, Gleimia coleocanis DSM 15436
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.