STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EEH64518.1Iron dependent repressor DNA binding domain protein; COG: COG1321; Pfam: PF01325,PF02742; InterPro: IPR001367. (270 aa)    
Predicted Functional Partners:
EEH63275.1
ABC transporter, ATP-binding protein; Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. Methionine importer (TC 3.A.1.24) family.
    
   0.880
EEH63967.1
Transcriptional regulator, Fur family; COG: COG0735; Pfam: PF01475; InterPro: IPR002481; Belongs to the Fur family.
  
  
 0.759
galE
UDP-glucose 4-epimerase; COG: COG1087; Pfam: PF01370; InterPro: IPR005886.
     
 0.569
rpoD
RNA polymerase sigma factor RpoD; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor is the primary sigma factor during exponential growth.
  
  
 0.542
EEH64519.1
NlpC/P60 family protein; COG: COG0791; Pfam: PF00877; InterPro: IPR000064.
       0.535
rpoB
DNA-directed RNA polymerase, beta subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
    
 
 0.517
EEH63631.1
Type III restriction enzyme, res subunit; COG: COG1061; Pfam: PF04851; InterPro: IPR014001.
 
     0.514
EEH63282.1
Methyltransferase, HemK family; COG: COG2890; Pfam: PF05175; InterPro: IPR007848; Belongs to the methyltransferase superfamily.
 
     0.488
EEH64111.1
LysR substrate binding domain protein; COG: COG0583; Pfam: PF00126,PF03466; InterPro: IPR005119; Belongs to the LysR transcriptional regulatory family.
  
 
 0.474
EEH63229.1
Cytochrome C biogenesis protein transmembrane region; Pfam: PF02683.
  
  
 0.424
Your Current Organism:
Gleimia coleocanis
NCBI taxonomy Id: 525245
Other names: Actinomyces coleocanis DSM 15436, Actinomyces coleocanis str. DSM 15436, Actinomyces coleocanis strain DSM 15436, G. coleocanis DSM 15436, Gleimia coleocanis DSM 15436
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.