STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
cddCytidine deaminase; This enzyme scavenges exogenous and endogenous cytidine and 2'-deoxycytidine for UMP synthesis; Belongs to the cytidine and deoxycytidylate deaminase family. (143 aa)    
Predicted Functional Partners:
pdp
Pyrimidine-nucleoside phosphorylase; COG: COG0213; Pfam: PF02885,PF00591,PF07831; InterPro: IPR000053.
 
 0.999
tdk
Thymidine kinase; COG: COG1435; Pfam: PF00265; InterPro: IPR001267.
    
 0.970
udk
Uridine kinase; COG: COG0572; Pfam: PF00485; InterPro: IPR000764.
    
 0.967
EEH63734.1
Purine nucleotide phosphorylase; The purine nucleoside phosphorylases catalyze the phosphorolytic breakdown of the N-glycosidic bond in the beta- (deoxy)ribonucleoside molecules, with the formation of the corresponding free purine bases and pentose-1-phosphate.
  
 
  0.937
EEH64473.1
LPXTG-motif cell wall anchor domain protein; COG: COG0737; Pfam: PF02872; InterPro: IPR006179.
    
  0.918
deoD
Purine nucleoside phosphorylase; COG: COG0813; Pfam: PF01048; InterPro: IPR004402.
    
  0.892
EEH63402.1
LPXTG-motif cell wall anchor domain protein; COG: COG2374; Pfam: PF03372,PF00746; InterPro: IPR005135.
    
  0.864
EEH63731.1
Deoxynucleoside kinase; COG: COG1428; Pfam: PF01712; InterPro: IPR002624.
    
 0.840
deoC-2
Deoxyribose-phosphate aldolase; Catalyzes a reversible aldol reaction between acetaldehyde and D-glyceraldehyde 3-phosphate to generate 2-deoxy-D-ribose 5- phosphate; Belongs to the DeoC/FbaB aldolase family. DeoC type 1 subfamily.
  
 
 0.796
era
Ribosome biogenesis GTPase Era; An essential GTPase that binds both GDP and GTP, with rapid nucleotide exchange. Plays a role in 16S rRNA processing and 30S ribosomal subunit biogenesis and possibly also in cell cycle regulation and energy metabolism.
  
    0.758
Your Current Organism:
Gleimia coleocanis
NCBI taxonomy Id: 525245
Other names: Actinomyces coleocanis DSM 15436, Actinomyces coleocanis str. DSM 15436, Actinomyces coleocanis strain DSM 15436, G. coleocanis DSM 15436, Gleimia coleocanis DSM 15436
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